seqan3-devel-3.4.0-0.1.rc1.fc40 in Fedora 40
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Package Info (Data from x86_64 build)
🠗 Changelog
🠗 Dependencies
🠗 Provides
🠗 Files
Changelog
| Date | Author | Change |
|---|---|---|
| 2024-01-30 | Jerry James <loganjerry at gmail dot com> - 3.4.0-0.1.rc1 | - Pre-release 3.4.0 RC1 - Remove unused dependency on coin-or-lemon - Convert License field to SPDX - Note that the devel package bundles zipstream and bzip2stream - Note that the devel package needs zlib-devel and bzip2-devel |
| 2024-01-27 | Fedora Release Engineering <releng at fedoraproject dot org> - 3.3.0-0.7.rc2 | - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild |
| 2023-08-10 | Antonio Trande <sagitter at fedoraproject dot org> - 3.3.0-0.6.rc2 | - Pre-release 3.3.0 RC2 |
| 2023-07-18 | Antonio Trande <sagitter at fedoraproject dot org> - 3.3.0-0.5.rc1 | - Pre-release 3.3.0 RC1 |
| 2023-04-06 | Antonio Trande <sagitter at fedoraproject dot org> - 3.3.0-0.4.20230403git8c604d98 | - Pre-release 3.3.0 commit #8c604d98 |
| 2023-03-30 | Antonio Trande <sagitter at fedoraproject dot org> - 3.3.0-0.3.20230330git174255ee | - Pre-release 3.3.0 commit #174255ee - Disable tests - Disable benchmarks |
| 2023-03-25 | Antonio Trande <sagitter at fedoraproject dot org> - 3.3.0-0.2.20230119gitc5ec15bd | - Pre-release 3.3.0 commit #c5ec15bd |
| 2023-01-24 | Antonio Trande <sagitter at fedoraproject dot org> - 3.3.0-0.1.20230119git404affbf | - Pre-release 3.3.0 commit #404affbf |
| 2023-01-21 | Fedora Release Engineering <releng at fedoraproject dot org> - 3.2.0-3 | - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild |
| 2022-07-23 | Fedora Release Engineering <releng at fedoraproject dot org> - 3.2.0-2 | - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild |
Dependencies
- bzip2-devel >= 1.0
- cereal-devel >= 1.3.2
- cmake >= 3.4
- cmake-filesystem
- range-v3-devel >= 0.11.0
- sdsl-lite-devel >= 3.0.1
- zlib-ng-compat-devel >= 1.2
Provides
- bundled(bzip2stream)
- bundled(zipstream)
- cmake(seqan3)
- seqan3-devel
- seqan3-devel(x86-64)
Files
- usr/
- include/
- seqan3/
- alignment/
- aligned_sequence/
- aligned_sequence_concept.hpp
- all.hpp
- debug_stream_alignment.hpp
- all.hpp
- cigar_conversion/
- alignment_from_cigar.hpp
- all.hpp
- cigar_from_alignment.hpp
- configuration/
- align_config_band.hpp
- align_config_debug.hpp
- align_config_edit.hpp
- align_config_gap_cost_affine.hpp
- align_config_method.hpp
- align_config_min_score.hpp
- align_config_on_result.hpp
- align_config_output.hpp
- align_config_parallel.hpp
- align_config_result_type.hpp
- align_config_score_type.hpp
- align_config_scoring_scheme.hpp
- align_config_vectorised.hpp
- all.hpp
- detail.hpp
- decorator/
- all.hpp
- gap_decorator.hpp
- detail/
- pairwise_alignment_concept.hpp
- exception.hpp
- matrix/
- all.hpp
- detail/
- advanceable_alignment_coordinate.hpp
- affine_cell_proxy.hpp
- aligned_sequence_builder.hpp
- alignment_matrix_column_major_range_base.hpp
- alignment_optimum.hpp
- alignment_score_matrix_one_column.hpp
- alignment_score_matrix_one_column_banded.hpp
- alignment_score_matrix_one_column_base.hpp
- alignment_score_matrix_proxy.hpp
- alignment_trace_matrix_base.hpp
- alignment_trace_matrix_full.hpp
- alignment_trace_matrix_full_banded.hpp
- alignment_trace_matrix_proxy.hpp
- all.hpp
- combined_score_and_trace_matrix.hpp
- coordinate_matrix.hpp
- debug_matrix.hpp
- edit_distance_score_matrix_full.hpp
- edit_distance_trace_matrix_full.hpp
- matrix_concept.hpp
- matrix_coordinate.hpp
- row_wise_matrix.hpp
- score_matrix_single_column.hpp
- trace_directions.hpp
- trace_iterator.hpp
- trace_iterator_banded.hpp
- trace_iterator_base.hpp
- trace_matrix_full.hpp
- two_dimensional_matrix.hpp
- two_dimensional_matrix_iterator_base.hpp
- two_dimensional_matrix_iterator_concept.hpp
- pairwise/
- align_pairwise.hpp
- align_result_selector.hpp
- alignment_algorithm.hpp
- alignment_configurator.hpp
- alignment_result.hpp
- all.hpp
- detail/
- alignment_algorithm_state.hpp
- concept.hpp
- pairwise_alignment_algorithm.hpp
- pairwise_alignment_algorithm_banded.hpp
- policy_affine_gap_recursion.hpp
- policy_affine_gap_recursion_banded.hpp
- policy_affine_gap_with_trace_recursion.hpp
- policy_affine_gap_with_trace_recursion_banded.hpp
- policy_alignment_matrix.hpp
- policy_alignment_result_builder.hpp
- policy_optimum_tracker.hpp
- policy_optimum_tracker_simd.hpp
- policy_scoring_scheme.hpp
- type_traits.hpp
- edit_distance_algorithm.hpp
- edit_distance_fwd.hpp
- edit_distance_unbanded.hpp
- policy/
- affine_gap_init_policy.hpp
- affine_gap_policy.hpp
- alignment_matrix_policy.hpp
- all.hpp
- find_optimum_policy.hpp
- scoring_scheme_policy.hpp
- simd_affine_gap_policy.hpp
- simd_find_optimum_policy.hpp
- scoring/
- all.hpp
- aminoacid_scoring_scheme.hpp
- detail/
- simd_match_mismatch_scoring_scheme.hpp
- simd_matrix_scoring_scheme.hpp
- nucleotide_scoring_scheme.hpp
- scoring_scheme_base.hpp
- scoring_scheme_concept.hpp
- aligned_sequence/
- alphabet/
- adaptation/
- all.hpp
- char.hpp
- uint.hpp
- all.hpp
- alphabet_base.hpp
- aminoacid/
- aa10li.hpp
- aa10murphy.hpp
- aa20.hpp
- aa27.hpp
- all.hpp
- aminoacid_base.hpp
- concept.hpp
- translation.hpp
- translation_details.hpp
- translation_genetic_code.hpp
- cigar/
- all.hpp
- cigar.hpp
- exposition_only/
- cigar_operation.hpp
- composite/
- all.hpp
- alphabet_tuple_base.hpp
- alphabet_variant.hpp
- detail.hpp
- semialphabet_any.hpp
- concept.hpp
- container/
- all.hpp
- bitpacked_sequence.hpp
- concatenated_sequences.hpp
- detail/
- alphabet_proxy.hpp
- concept.hpp
- convert.hpp
- debug_stream_alphabet.hpp
- exception.hpp
- gap/
- all.hpp
- gap.hpp
- gapped.hpp
- hash.hpp
- mask/
- all.hpp
- mask.hpp
- masked.hpp
- nucleotide/
- all.hpp
- concept.hpp
- dna15.hpp
- dna16sam.hpp
- dna3bs.hpp
- dna4.hpp
- dna5.hpp
- nucleotide_base.hpp
- rna15.hpp
- rna4.hpp
- rna5.hpp
- quality/
- aliases.hpp
- all.hpp
- concept.hpp
- phred42.hpp
- phred63.hpp
- phred68solexa.hpp
- phred94.hpp
- phred_base.hpp
- qualified.hpp
- range/
- all.hpp
- hash.hpp
- sequence.hpp
- structure/
- all.hpp
- concept.hpp
- dot_bracket3.hpp
- dssp9.hpp
- structured_aa.hpp
- structured_rna.hpp
- wuss.hpp
- views/
- all.hpp
- char_strictly_to.hpp
- char_to.hpp
- complement.hpp
- rank_to.hpp
- to_char.hpp
- to_rank.hpp
- translate.hpp
- translate_join.hpp
- trim_quality.hpp
- validate_char_for.hpp
- adaptation/
- argument_parser/
- all.hpp
- argument_parser.hpp
- auxiliary.hpp
- detail/
- concept.hpp
- format_base.hpp
- format_help.hpp
- format_html.hpp
- format_man.hpp
- format_parse.hpp
- terminal.hpp
- version_check.hpp
- exceptions.hpp
- validators.hpp
- contrib/
- README.md
- parallel/
- buffer_queue.hpp
- serialised_resource_pool.hpp
- suspendable_queue.hpp
- std/
- LICENSE
- README.md
- all_view.hpp
- chunk_view.hpp
- concepts.hpp
- detail/
- adaptor_base.hpp
- adaptor_for_view_without_args.hpp
- adaptor_from_functor.hpp
- compiler_definitions.hpp
- exposition_only.hpp
- non_propagating_cache.hpp
- join_with_view.hpp
- pair.hpp
- to.hpp
- tuple.hpp
- zip_view.hpp
- stream/
- bgzf.hpp
- bgzf_istream.hpp
- bgzf_ostream.hpp
- bgzf_stream_util.hpp
- bz2_istream.hpp
- bz2_ostream.hpp
- gz_istream.hpp
- gz_ostream.hpp
- core/
- add_enum_bitwise_operators.hpp
- algorithm/
- algorithm_result_generator_range.hpp
- all.hpp
- detail/
- algorithm_executor_blocking.hpp
- all.hpp
- execution_handler_parallel.hpp
- execution_handler_sequential.hpp
- all.hpp
- concept/
- all.hpp
- cereal.hpp
- configuration/
- all.hpp
- configuration.hpp
- detail/
- all.hpp
- concept.hpp
- configuration_element_debug_mode.hpp
- configuration_element_parallel_mode.hpp
- configuration_utility.hpp
- pipeable_config_element.hpp
- debug_stream/
- all.hpp
- byte.hpp
- debug_stream_type.hpp
- detail/
- to_string.hpp
- optional.hpp
- range.hpp
- tuple.hpp
- variant.hpp
- debug_stream.hpp
- detail/
- all.hpp
- all_view.hpp
- copyable_wrapper.hpp
- customisation_point.hpp
- deferred_crtp_base.hpp
- empty_type.hpp
- is_class_template_declarable.hpp
- iterator_traits.hpp
- strong_type.hpp
- template_inspection.hpp
- test_accessor.hpp
- transfer_type_modifier_onto.hpp
- platform.hpp
- range/
- all.hpp
- detail/
- adaptor_base.hpp
- adaptor_for_view_without_args.hpp
- adaptor_from_functor.hpp
- inherited_iterator_base.hpp
- misc.hpp
- random_access_iterator.hpp
- type_traits.hpp
- io/
- all.hpp
- detail/
- ignore_output_iterator.hpp
- in_file_iterator.hpp
- magic_header.hpp
- misc.hpp
- misc_input.hpp
- misc_output.hpp
- out_file_iterator.hpp
- record.hpp
- record_like.hpp
- safe_filesystem_entry.hpp
- exception.hpp
- record.hpp
- sam_file/
- all.hpp
- detail/
- cigar.hpp
- format_sam_base.hpp
- format_bam.hpp
- format_sam.hpp
- header.hpp
- input.hpp
- input_format_concept.hpp
- input_options.hpp
- output.hpp
- output_format_concept.hpp
- output_options.hpp
- record.hpp
- sam_flag.hpp
- sam_tag_dictionary.hpp
- sequence_file/
- all.hpp
- format_embl.hpp
- format_fasta.hpp
- format_fastq.hpp
- format_genbank.hpp
- input.hpp
- input_format_concept.hpp
- input_options.hpp
- output.hpp
- output_format_concept.hpp
- output_options.hpp
- record.hpp
- stream/
- all.hpp
- concept.hpp
- detail/
- fast_istreambuf_iterator.hpp
- fast_ostreambuf_iterator.hpp
- stream_buffer_exposer.hpp
- structure_file/
- all.hpp
- detail.hpp
- format_vienna.hpp
- input.hpp
- input_format_concept.hpp
- input_options.hpp
- output.hpp
- output_format_concept.hpp
- output_options.hpp
- record.hpp
- views/
- all.hpp
- async_input_buffer.hpp
- detail/
- istreambuf_view.hpp
- take_exactly_view.hpp
- take_line_view.hpp
- take_until_view.hpp
- search/
- all.hpp
- configuration/
- all.hpp
- default_configuration.hpp
- detail.hpp
- hit.hpp
- max_error.hpp
- max_error_common.hpp
- on_result.hpp
- output.hpp
- parallel.hpp
- result_type.hpp
- detail/
- policy_max_error.hpp
- policy_search_result_builder.hpp
- search_common.hpp
- search_configurator.hpp
- search_scheme_algorithm.hpp
- search_scheme_precomputed.hpp
- search_traits.hpp
- unidirectional_search_algorithm.hpp
- dream_index/
- all.hpp
- interleaved_bloom_filter.hpp
- fm_index/
- all.hpp
- bi_fm_index.hpp
- bi_fm_index_cursor.hpp
- concept.hpp
- detail/
- fm_index_cursor.hpp
- fm_index.hpp
- fm_index_cursor.hpp
- kmer_index/
- all.hpp
- shape.hpp
- search.hpp
- search_result.hpp
- views/
- all.hpp
- kmer_hash.hpp
- minimiser.hpp
- minimiser_hash.hpp
- std/
- charconv
- new
- utility/
- all.hpp
- bloom_filter/
- all.hpp
- bloom_filter.hpp
- char_operations/
- all.hpp
- predicate.hpp
- predicate_detail.hpp
- pretty_print.hpp
- transform.hpp
- concept.hpp
- container/
- aligned_allocator.hpp
- all.hpp
- concept.hpp
- dynamic_bitset.hpp
- small_string.hpp
- small_vector.hpp
- detail/
- bits_of.hpp
- integer_traits.hpp
- multi_invocable.hpp
- to_little_endian.hpp
- type_name_as_string.hpp
- math.hpp
- parallel/
- all.hpp
- detail/
- all.hpp
- latch.hpp
- reader_writer_manager.hpp
- spin_delay.hpp
- range/
- all.hpp
- concept.hpp
- to.hpp
- simd/
- algorithm.hpp
- all.hpp
- concept.hpp
- detail/
- builtin_simd.hpp
- builtin_simd_intrinsics.hpp
- debug_stream_simd.hpp
- default_simd_backend.hpp
- default_simd_length.hpp
- simd_algorithm_avx2.hpp
- simd_algorithm_avx512.hpp
- simd_algorithm_sse4.hpp
- simd.hpp
- simd_traits.hpp
- views/
- all.hpp
- iota_simd.hpp
- to_simd.hpp
- tuple/
- all.hpp
- common_pair.hpp
- common_tuple.hpp
- concept.hpp
- pod_tuple.hpp
- pop_front.hpp
- split.hpp
- type_list/
- all.hpp
- detail/
- type_list_algorithm.hpp
- traits.hpp
- type_list.hpp
- type_pack/
- all.hpp
- detail/
- type_pack_algorithm.hpp
- traits.hpp
- type_traits/
- all.hpp
- basic.hpp
- concept.hpp
- detail/
- transformation_trait_or.hpp
- function_traits.hpp
- lazy_conditional.hpp
- views/
- all.hpp
- chunk.hpp
- convert.hpp
- deep.hpp
- detail/
- helper.hpp
- non_propagating_cache.hpp
- elements.hpp
- enforce_random_access.hpp
- interleave.hpp
- join_with.hpp
- pairwise_combine.hpp
- repeat.hpp
- repeat_n.hpp
- single_pass_input.hpp
- slice.hpp
- type_reduce.hpp
- zip.hpp
- version.hpp
- alignment/
- seqan3/
- lib64/
- cmake/
- seqan3/
- seqan3-config-version.cmake
- seqan3-config.cmake
- seqan3-install.cmake
- seqan3-package.cmake
- seqan3/
- cmake/
- share/
- doc/
- seqan3-devel/
- README.md
- seqan3-devel/
- licenses/
- seqan3-devel/
- LICENSE.md
- seqan3-devel/
- doc/
- include/
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