python3-pysam-devel-0.22.1-3.fc42 in Fedora 42
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Package Info (Data from x86_64 build)
🠗 Changelog
🠗 Dependencies
🠗 Provides
🠗 Files
Changelog
| Date | Author | Change |
|---|---|---|
| 2025-01-18 | Fedora Release Engineering <releng at fedoraproject dot org> - 0.22.1-3 | - Rebuilt for https://fedoraproject.org/wiki/Fedora_42_Mass_Rebuild |
| 2024-07-19 | Fedora Release Engineering <releng at fedoraproject dot org> - 0.22.1-2 | - Rebuilt for https://fedoraproject.org/wiki/Fedora_41_Mass_Rebuild |
| 2024-06-14 | j-b-o <j dash b dash o at users dot noreply dot github dot com> - 0.22.1-1 | - update to 0.22.1 |
| 2024-06-07 | Python Maint <python dash maint at redhat dot com> - 0.22.0-6 | - Rebuilt for Python 3.13 |
| 2024-06-07 | Python Maint <python dash maint at redhat dot com> - 0.22.0-5 | - Rebuilt for Python 3.13 |
| 2024-01-26 | Fedora Release Engineering <releng at fedoraproject dot org> - 0.22.0-4 | - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild |
| 2024-01-22 | Fedora Release Engineering <releng at fedoraproject dot org> - 0.22.0-3 | - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild |
| 2023-11-30 | Florian Weimer <fweimer at redhat dot com> - 0.22.0-2 | - Fix C compatibility issue in the bundled htslib configure script |
| 2023-11-14 | David Bold <davidsch at fedoraproject dot org> - 0.22.0-1 | - Update to 0.22.0 |
| 2023-09-05 | David Bold <dave at ipp dot mpg dot de> - 0.21.0-2 | - Convert to SPDX |
Dependencies
- python3 = 3.13
- python3-pysam = 0.22.1-3.fc42
Provides
- python-pysam-devel
- python3-pysam-devel
- python3-pysam-devel(x86-64)
- python3.13-pysam-devel
Files
- usr/
- lib64/
- python3.13/
- site-packages/
- pysam/
- cbcftools_util.h
- csamtools_util.h
- htslib_util.h
- include/
- __init__.py
- __pycache__/
- __init__.cpython-313.opt-1.pyc
- __init__.cpython-313.pyc
- bcftools/
- HMM.c
- HMM.c.pysam.c
- HMM.h
- LICENSE
- README
- abuf.c
- abuf.c.pysam.c
- abuf.h
- bam2bcf.c
- bam2bcf.c.pysam.c
- bam2bcf.h
- bam2bcf_iaux.c
- bam2bcf_iaux.c.pysam.c
- bam2bcf_indel.c
- bam2bcf_indel.c.pysam.c
- bam_sample.c
- bam_sample.c.pysam.c
- bam_sample.h
- bcftools.h
- bcftools.pysam.c
- bcftools.pysam.h
- bin.c
- bin.c.pysam.c
- bin.h
- call.h
- ccall.c
- ccall.c.pysam.c
- cigar_state.h
- cols.c
- cols.c.pysam.c
- cols.h
- config.h
- consensus.c
- consensus.c.pysam.c
- convert.c
- convert.c.pysam.c
- convert.h
- csq.c
- csq.c.pysam.c
- dbuf.h
- dist.c
- dist.c.pysam.c
- dist.h
- em.c
- em.c.pysam.c
- extsort.c
- extsort.c.pysam.c
- extsort.h
- filter.c
- filter.c.pysam.c
- filter.h
- gff.c
- gff.c.pysam.c
- gff.h
- gvcf.c
- gvcf.c.pysam.c
- gvcf.h
- hclust.c
- hclust.c.pysam.c
- hclust.h
- hex.h
- khash_str2str.h
- kheap.h
- kmin.c
- kmin.c.pysam.c
- kmin.h
- main.c
- main.c.pysam.c
- mcall.c
- mcall.c.pysam.c
- mpileup.c
- mpileup.c.pysam.c
- mw.h
- ploidy.c
- ploidy.c.pysam.c
- ploidy.h
- prob1.c
- prob1.c.pysam.c
- prob1.h
- rbuf.h
- read_consensus.c
- read_consensus.c.pysam.c
- read_consensus.h
- regidx.c
- regidx.c.pysam.c
- regidx.h
- reheader.c
- reheader.c.pysam.c
- smpl_ilist.c
- smpl_ilist.c.pysam.c
- smpl_ilist.h
- str_finder.c
- str_finder.c.pysam.c
- str_finder.h
- tabix.c
- tabix.c.pysam.c
- tsv2vcf.c
- tsv2vcf.c.pysam.c
- tsv2vcf.h
- utlist.h
- variantkey.h
- vcfannotate.c
- vcfannotate.c.pysam.c
- vcfbuf.c
- vcfbuf.c.pysam.c
- vcfbuf.h
- vcfcall.c
- vcfcall.c.pysam.c
- vcfcnv.c
- vcfcnv.c.pysam.c
- vcfconcat.c
- vcfconcat.c.pysam.c
- vcfconvert.c
- vcfconvert.c.pysam.c
- vcffilter.c
- vcffilter.c.pysam.c
- vcfgtcheck.c
- vcfgtcheck.c.pysam.c
- vcfhead.c
- vcfhead.c.pysam.c
- vcfindex.c
- vcfindex.c.pysam.c
- vcfisec.c
- vcfisec.c.pysam.c
- vcfmerge.c
- vcfmerge.c.pysam.c
- vcfnorm.c
- vcfnorm.c.pysam.c
- vcfplugin.c
- vcfplugin.c.pysam.c
- vcfquery.c
- vcfquery.c.pysam.c
- vcfroh.c
- vcfroh.c.pysam.c
- vcfsom.c
- vcfsom.c.pysam.c
- vcfsort.c
- vcfsort.c.pysam.c
- vcfstats.c
- vcfstats.c.pysam.c
- vcfview.c
- vcfview.c.pysam.c
- vcmp.c
- vcmp.c.pysam.c
- vcmp.h
- version.c
- version.c.pysam.c
- version.sh
- htslib/
- LICENSE
- Makefile
- README
- bcf_sr_sort.c
- bcf_sr_sort.h
- bgzf.c
- bgzip.c
- builddir_vars.mk.in
- config.h
- config.h.in
- config.mk.in
- configure
- configure.ac
- cram/
- cram.h
- cram_codecs.c
- cram_codecs.h
- cram_decode.c
- cram_decode.h
- cram_encode.c
- cram_encode.h
- cram_external.c
- cram_index.c
- cram_index.h
- cram_io.c
- cram_io.h
- cram_samtools.h
- cram_stats.c
- cram_stats.h
- cram_structs.h
- mFILE.c
- mFILE.h
- misc.h
- open_trace_file.c
- open_trace_file.h
- os.h
- pooled_alloc.c
- pooled_alloc.h
- string_alloc.c
- string_alloc.h
- errmod.c
- faidx.c
- header.c
- header.h
- hfile.c
- hfile_gcs.c
- hfile_internal.h
- hfile_libcurl.c
- hfile_s3.c
- hfile_s3_write.c
- hts.c
- hts_expr.c
- hts_internal.h
- hts_os.c
- hts_time_funcs.h
- htscodecs/
- htscodecs/
- arith_dynamic.c
- arith_dynamic.h
- c_range_coder.h
- c_simple_model.h
- fqzcomp_qual.c
- fqzcomp_qual.h
- htscodecs.c
- htscodecs.h
- htscodecs_endian.h
- pack.c
- pack.h
- permute.h
- pooled_alloc.h
- rANS_byte.h
- rANS_static.c
- rANS_static.h
- rANS_static16_int.h
- rANS_static32x16pr.c
- rANS_static32x16pr.h
- rANS_static32x16pr_avx2.c
- rANS_static32x16pr_avx512.c
- rANS_static32x16pr_neon.c
- rANS_static32x16pr_sse4.c
- rANS_static4x16.h
- rANS_static4x16pr.c
- rANS_word.h
- rle.c
- rle.h
- tokenise_name3.c
- tokenise_name3.h
- utils.c
- utils.h
- varint.h
- varint2.h
- version.h
- htscodecs/
- htscodecs_bundled.mk
- htscodecs_external.mk
- htsfile.c
- htslib/
- bgzf.h
- cram.h
- faidx.h
- hfile.h
- hts.h
- hts_defs.h
- hts_endian.h
- hts_expr.h
- hts_log.h
- hts_os.h
- kbitset.h
- kfunc.h
- khash.h
- khash_str2int.h
- klist.h
- knetfile.h
- kroundup.h
- kseq.h
- ksort.h
- kstring.h
- regidx.h
- sam.h
- synced_bcf_reader.h
- tbx.h
- thread_pool.h
- vcf.h
- vcf_sweep.h
- vcfutils.h
- htslib.mk
- htslib.pc.in
- htslib_vars.mk
- kfunc.c
- kstring.c
- m4/
- hts_check_compile_flags_needed.m4
- hts_hide_dynamic_syms.m4
- hts_prog_cc_warnings.m4
- pkg.m4
- md5.c
- multipart.c
- os/
- lzma_stub.h
- rand.c
- plugin.c
- probaln.c
- realn.c
- regidx.c
- region.c
- sam.c
- sam_internal.h
- sam_mods.c
- synced_bcf_reader.c
- tabix.c
- tbx.c
- textutils.c
- textutils_internal.h
- thread_pool.c
- thread_pool_internal.h
- vcf.c
- vcf_sweep.c
- vcfutils.c
- version.sh
- samtools/
- LICENSE
- README
- amplicon_stats.c
- amplicon_stats.c.pysam.c
- bam.c
- bam.c.pysam.c
- bam.h
- bam2depth.c
- bam2depth.c.pysam.c
- bam_addrprg.c
- bam_addrprg.c.pysam.c
- bam_ampliconclip.c
- bam_ampliconclip.c.pysam.c
- bam_ampliconclip.h
- bam_aux.c
- bam_aux.c.pysam.c
- bam_cat.c
- bam_cat.c.pysam.c
- bam_color.c
- bam_color.c.pysam.c
- bam_consensus.c
- bam_consensus.c.pysam.c
- bam_fastq.c
- bam_fastq.c.pysam.c
- bam_flags.c
- bam_flags.c.pysam.c
- bam_import.c
- bam_import.c.pysam.c
- bam_index.c
- bam_index.c.pysam.c
- bam_lpileup.c
- bam_lpileup.c.pysam.c
- bam_lpileup.h
- bam_markdup.c
- bam_markdup.c.pysam.c
- bam_mate.c
- bam_mate.c.pysam.c
- bam_md.c
- bam_md.c.pysam.c
- bam_plbuf.c
- bam_plbuf.c.pysam.c
- bam_plbuf.h
- bam_plcmd.c
- bam_plcmd.c.pysam.c
- bam_quickcheck.c
- bam_quickcheck.c.pysam.c
- bam_reheader.c
- bam_reheader.c.pysam.c
- bam_rmdup.c
- bam_rmdup.c.pysam.c
- bam_rmdupse.c
- bam_rmdupse.c.pysam.c
- bam_samples.c
- bam_samples.c.pysam.c
- bam_sort.c
- bam_sort.c.pysam.c
- bam_split.c
- bam_split.c.pysam.c
- bam_stat.c
- bam_stat.c.pysam.c
- bamshuf.c
- bamshuf.c.pysam.c
- bamtk.c
- bamtk.c.pysam.c
- bedcov.c
- bedcov.c.pysam.c
- bedidx.c
- bedidx.c.pysam.c
- bedidx.h
- config.h
- consensus_pileup.c
- consensus_pileup.c.pysam.c
- consensus_pileup.h
- coverage.c
- coverage.c.pysam.c
- cram_size.c
- cram_size.c.pysam.c
- cut_target.c
- cut_target.c.pysam.c
- dict.c
- dict.c.pysam.c
- faidx.c
- faidx.c.pysam.c
- lz4/
- LICENSE
- lz4.c
- lz4.c.pysam.c
- lz4.h
- padding.c
- padding.c.pysam.c
- phase.c
- phase.c.pysam.c
- reference.c
- reference.c.pysam.c
- reset.c
- reset.c.pysam.c
- sam_opts.c
- sam_opts.c.pysam.c
- sam_opts.h
- sam_utils.c
- sam_utils.c.pysam.c
- sam_utils.h
- sam_view.c
- sam_view.c.pysam.c
- sample.c
- sample.c.pysam.c
- sample.h
- samtools.h
- samtools.pysam.c
- samtools.pysam.h
- splaysort.h
- stats.c
- stats.c.pysam.c
- stats_isize.c
- stats_isize.c.pysam.c
- stats_isize.h
- tmp_file.c
- tmp_file.c.pysam.c
- tmp_file.h
- version.sh
- libcalignedsegment.pxd
- libcalignmentfile.pxd
- libcbcf.pxd
- libcbcftools.pxd
- libcfaidx.pxd
- libchtslib.pxd
- libcsamfile.pxd
- libcsamtools.pxd
- libctabix.pxd
- libctabixproxies.pxd
- libcutils.pxd
- libcvcf.pxd
- pysam_stream.h
- pysam_util.h
- version.h
- pysam/
- site-packages/
- python3.13/
- lib64/
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