Fedora Packages

bowtie2

An ultra fast and memory-efficient read aligner

Bowtie 2 is an ultra fast and memory-efficient tool for aligning sequencing reads to long reference sequences. It is particularly good at aligning reads of about 50 up to 100s or 1,000s of characters, and particularly good at aligning to relatively long (e.g. mammalian) genomes. Bowtie 2 indexes the genome with an FM Index to keep its memory footprint small: for the human genome, its memory footprint is typically around 3.2 GB. Bowtie 2 supports gapped, local, and paired-end alignment modes.

Releases Overview

Release Stable Testing
Fedora Rawhide 2.4.1-6.fc37 -
Fedora 37 2.4.1-6.fc37 -
Fedora 36 2.4.1-5.fc36 -
Fedora 35 2.4.1-4.fc35 -
EPEL 8 2.4.1-1.el8 -
EPEL 7 2.4.1-1.el7 -
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Package Info

You can contact the maintainers of this package via email at bowtie2 dash maintainers at fedoraproject dot org.



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